BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B01SP1|AL430482
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1484 1642 0.0
>3x_Contig1484
Length = 9345
Score = 1642 bits (818), Expect = 0.0
Identities = 864/890 (97%)
Strand = Plus / Plus
Query: 1 tgataggatcttacatgaaaaaattcttcttatttctgadccgttgacgctcttaggata 60
|||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6548 tgatagtagcttacatgaaaaaattcttcttatttctgatccgttgacgctcttaggata 6607
Query: 61 tcttcgtatacwtcwgtctgggaactatcatctatctgccccatttttgaagaaagcaag 120
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6608 tcttcgtatacttctgtctgggaactatcatctatctgccccatttttgaagaaagcaag 6667
Query: 121 gccgaagtatctatcattgkggtatgaaaccggagargcgtccggggkatcacaatgggg 180
||||||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 6668 gccgaagtatctatcattgttgtatgaaaccggagatgcgtccggtgtatcacaatgggt 6727
Query: 181 tgacaatatkgacctkaaaaacatcgaagtggagagtattgkagatattatdaacggaaa 240
||||||||| ||||| |||||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 6728 tgacaatattgaccttaaaaacatcgaagttgagagtattgtagatattattaacggaaa 6787
Query: 241 wagggattcgagaactttgatacgattgcbagtacggctaaagaactatgggtcggcaat 300
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 6788 tagggattcgagaactttgatacgattgctagtacggctaaagaactatgggtcggcaat 6847
Query: 301 agaaaaaadaaactcgaaaatcaacgagttattacaaaadaatgattttgacgaaattga 360
||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6848 agataaaataaactcgaaaatcaacgagttattacaaaataatgattttgacgaaattga 6907
Query: 361 aaatkatktggatttaggcatcagtgtatcccagaagacagatgaaactaacaagaactg 420
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6908 taattatttggatttaggcatcagtgtatcccagaagacagatgaaactaacaagaactg 6967
Query: 421 ggttaaattgatatcaaacttggtctctcaatacccaactcttaccgatgatcaaaaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6968 ggttaaattgatatcaaacttggtctctcaatacccaactcttaccgatgatcaaaaagc 7027
Query: 481 gttttgtgataaaagtttgcagaaagtatttatkgagctttcagatgggaacctgaatga 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7028 gttttgtgataaaagtttgcagaaagtatttattgagctttcagatgggaacctgaatga 7087
Query: 541 gatcgaaaactcggaggagagctttttctggaagaccctaatggagatatttgaaaacaa 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7088 tatcgaaaactcggaggagagctttttctggaagaccctaatggagatatttgaaaacaa 7147
Query: 601 atctcttatcttgagtaaaatcaaagatattaaagtggtgttgaagaatattttcacagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7148 atctcttatcttgagtaaaatcaaagatattaaagtggtgttgaagaatattttcacagc 7207
Query: 661 ttattctgtcgaagagacagtgaaacttcttattttacagattatcaatcaaagtgcatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7208 ttattctgtcgaagagacagtgaaacttcttattttacagattatcaatcaaagtgcatc 7267
Query: 721 atcagatattacaacctatatgcacagaaaagaacatggttgggcaattcagtctcatga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7268 atcagatattacaacctatatgcacagaaaagaacatggttgggcaattcagtctcatga 7327
Query: 781 gtgtgaagtatgtggcaagaaaatatggggaattggaatcgataataaagtctttgaaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7328 gtgtgaagtatgtggcaagaaaatatggggaattggaatcgataataaagtctttgaaca 7387
Query: 841 gtgggagtcagcgagatgccacgaggtcgccgctagtggtagcagtgcac 890
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7388 gtgggagtcagcgagatgccacgaggtcgccgctagtggtagcagtgcac 7437
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6249
Number of Sequences: 1807
Number of extensions: 6249
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)